bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0022184
HIT000202838 (
NM_006231
)
(DNA polymerase epsilon catalytic subunit A.)
genome : 133,200,348 - 133,263,945 (63,598)
query : 1 - 7,840 (7,840/7,859)
49 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.971;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.7
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR006133 : DNA-directed DNA polymerase, family B, exonuclease domain
IPR006134 : DNA-directed DNA polymerase, family B, multifunctional domain
IPR006172 : DNA-directed DNA polymerase, family B
IPR012337 : Ribonuclease H-like
IPR013697 : DNA polymerase epsilon, catalytic subunit A, C-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0005634 : Cellular Component : nucleus
0006139 : Biological Process : nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
0006260 : Biological Process : DNA replication
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 9.83333, cyto_mito 5.16667, plas 5,
cyto 4.5, mito 4.5, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0022184
HIT000122473 (
ENST00000320574
)
(DNA polymerase epsilon catalytic subunit A.)
genome : 133,200,348 - 133,263,945 (63,598)
query : 1 - 7,840 (7,840/7,840)
49 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.971;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.7
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR006133 : DNA-directed DNA polymerase, family B, exonuclease domain
IPR006134 : DNA-directed DNA polymerase, family B, multifunctional domain
IPR006172 : DNA-directed DNA polymerase, family B
IPR012337 : Ribonuclease H-like
IPR013697 : DNA polymerase epsilon, catalytic subunit A, C-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0005634 : Cellular Component : nucleus
0006139 : Biological Process : nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
0006260 : Biological Process : DNA replication
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 9.83333, cyto_mito 5.16667, plas 5,
cyto 4.5, mito 4.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0022184
HIT000553686 (
ENST00000455752
)
(Similar to DNA polymerase epsilon catalytic subunit A; EC=2.7.7.7; DNA polymerase II subunit A;)
genome : 133,200,348 - 133,263,945 (63,598)
query : 1 - 7,849 (7,849/7,849)
49 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.965;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.7
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR006133 : DNA-directed DNA polymerase, family B, exonuclease domain
IPR006134 : DNA-directed DNA polymerase, family B, multifunctional domain
IPR006172 : DNA-directed DNA polymerase, family B
IPR012337 : Ribonuclease H-like
IPR013697 : DNA polymerase epsilon, catalytic subunit A, C-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0005634 : Cellular Component : nucleus
0006139 : Biological Process : nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
0006260 : Biological Process : DNA replication
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 9.33333, plas 5,
cyto_mito 4.83333, mito 4.5, cyto 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0022184
HIT000502967
(
BC144561
)
Representative transcript
(DNA polymerase epsilon catalytic subunit A; EC=2.7.7.7; DNA polymerase II subunit A;)
genome : 133,200,849 - 133,263,933 (63,085)
query : 1 - 8,011 (8,011/8,011)
49 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.971;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013697 : DNA polymerase epsilon, catalytic subunit A, C-terminal
GO :
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 9.5, nucl 8.5, cyto_nucl 6.5, extr_plas 6,
pero 5, cyto 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF123502
Gallus
sp. (Chicken) : AJ851596
Danio
sp. (Zebrafish) : BC154499
Bos
sp. (Cow) : ENSBTAT00000029712
Monodelphis
sp. (Opossum) : ENSMODT00000019301
Oryzias
sp. (Medaka) : ENSORLT00000009821
Pongo
sp. (Orangutan) : ENSPPYT00000006087
Pan
sp. (Chimpanzee) : ENSPTRT00000010409
Tetraodon
sp. (Tetraodon) : GSTENT00029542001
Takifugu
sp. (Fugu) : SINFRUT00000155040
Rattus
sp. (Rat) : XM_001078777
Macaca
sp. (Macaque) : XM_001086545
Equus
sp. (Horse) : XM_001915711
Canis
sp. (Dog) : XM_543348
HIX0022184
HIT000636109 (
ENST00000537064
)
(DNA polymerase epsilon catalytic subunit A; EC=2.7.7.7; DNA polymerase II subunit A;)
genome : 133,200,849 - 133,263,933 (63,085)
query : 1 - 8,011 (8,011/8,011)
49 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.971;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013697 : DNA polymerase epsilon, catalytic subunit A, C-terminal
GO :
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 9.5, nucl 8.5, cyto_nucl 6.5, extr_plas 6,
pero 5, cyto 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0022184
HIT000191980
(
L09561
)
(DNA polymerase epsilon catalytic subunit A; EC=2.7.7.7; DNA polymerase II subunit A;)
genome : 133,201,276 - 133,263,945 (62,670)
query : 1 - 6,912 (6,912/6,912)
49 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.971;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.7
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR006134 : DNA-directed DNA polymerase, family B, multifunctional domain
IPR012337 : Ribonuclease H-like
IPR013697 : DNA polymerase epsilon, catalytic subunit A, C-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 10.5, cyto_mito 9.33333,
cyto_nucl 7.33333, E.R._mito 7.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0022184
HIT000215906
(
S60080
)
(DNA polymerase; EC=2.7.7.7;)
genome : 133,201,276 - 133,263,914 (62,639)
query : 1 - 6,794 (6,794/6,794)
48 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.920;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.7
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR006133 : DNA-directed DNA polymerase, family B, exonuclease domain
IPR006134 : DNA-directed DNA polymerase, family B, multifunctional domain
IPR006172 : DNA-directed DNA polymerase, family B
IPR012337 : Ribonuclease H-like
IPR013697 : DNA polymerase epsilon, catalytic subunit A, C-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0005634 : Cellular Component : nucleus
0006139 : Biological Process : nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
0006260 : Biological Process : DNA replication
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 9.83333, cyto_mito 5.16667, plas 5,
cyto 4.5, mito 4.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0022184
HIT000634315 (
ENST00000535270
)
(DNA polymerase epsilon catalytic subunit A; EC=2.7.7.7; DNA polymerase II subunit A;)
genome : 133,201,276 - 133,263,914 (62,639)
query : 1 - 6,800 (6,800/6,800)
48 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.971;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.7
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR006133 : DNA-directed DNA polymerase, family B, exonuclease domain
IPR006134 : DNA-directed DNA polymerase, family B, multifunctional domain
IPR006172 : DNA-directed DNA polymerase, family B
IPR012337 : Ribonuclease H-like
IPR013697 : DNA polymerase epsilon, catalytic subunit A, C-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0005634 : Cellular Component : nucleus
0006139 : Biological Process : nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
0006260 : Biological Process : DNA replication
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 9.83333, cyto_mito 5.16667, plas 5,
cyto 4.5, mito 4.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0022184
HIT000220094
(
U49356
)
(DNA polymerase epsilon catalytic subunit A; EC=2.7.7.7; DNA polymerase II subunit A;)
genome : 133,201,283 - 133,263,901 (62,619)
query : 1 - 6,858 (6,858/6,858)
49 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.949;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.7
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR006133 : DNA-directed DNA polymerase, family B, exonuclease domain
IPR006134 : DNA-directed DNA polymerase, family B, multifunctional domain
IPR006172 : DNA-directed DNA polymerase, family B
IPR012337 : Ribonuclease H-like
IPR013697 : DNA polymerase epsilon, catalytic subunit A, C-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0005634 : Cellular Component : nucleus
0006139 : Biological Process : nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
0006260 : Biological Process : DNA replication
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 9.83333, cyto_mito 5.16667, plas 5,
cyto 4.5, mito 4.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0022184
HIT000638051 (
ENST00000539006
)
(Similar to DNA polymerase epsilon catalytic subunit A; EC=2.7.7.7; DNA polymerase II subunit A;)
genome : 133,225,513 - 133,254,307 (28,795)
query : 1 - 3,575 (3,575/3,575)
26 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.971;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.7
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR006133 : DNA-directed DNA polymerase, family B, exonuclease domain
IPR006134 : DNA-directed DNA polymerase, family B, multifunctional domain
IPR006172 : DNA-directed DNA polymerase, family B
IPR012337 : Ribonuclease H-like
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0006139 : Biological Process : nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15.8333, nucl 11.5,
cyto_mito 10.3333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0022184
HIT000357857 (
ENST00000376577
)
(Similar to DNA polymerase epsilon catalytic subunit A; EC=2.7.7.7; DNA polymerase II subunit A;)
genome : 133,233,777 - 133,263,945 (30,169)
query : 1 - 3,569 (3,569/3,569)
29 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.971;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.7
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR006133 : DNA-directed DNA polymerase, family B, exonuclease domain
IPR006134 : DNA-directed DNA polymerase, family B, multifunctional domain
IPR006172 : DNA-directed DNA polymerase, family B
IPR012337 : Ribonuclease H-like
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0006139 : Biological Process : nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0022184
HIT000638260 (
ENST00000539215
)
(Similar to DNA polymerase epsilon catalytic subunit A; EC=2.7.7.7; DNA polymerase II subunit A;)
genome : 133,248,867 - 133,250,227 (1,361)
query : 1 - 483 (483/483)
4 exons
identity = 0.992
3'(1.000;1.000;1.000;0.944)5'
coverage = 1.000
InterPro :
IPR012337 : Ribonuclease H-like
GO :
0003676 : Molecular Function : nucleic acid binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.5, extr 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0022184
HIT000644060 (
ENST00000545015
)
(Similar to DNA polymerase epsilon catalytic subunit A; EC=2.7.7.7; DNA polymerase II subunit A;)
genome : 133,249,130 - 133,249,819 (690)
query : 1 - 366 (366/366)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, cyto 4.5, cyto_nucl 4, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0022184
HIT000634979 (
ENST00000535934
)
(Similar to DNA polymerase epsilon catalytic subunit A; EC=2.7.7.7; DNA polymerase II subunit A;)
genome : 133,249,213 - 133,253,084 (3,872)
query : 1 - 1,561 (1,561/1,561)
4 exons
identity = 0.997
3'(1.000;1.000;0.971;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.7
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR006133 : DNA-directed DNA polymerase, family B, exonuclease domain
IPR012337 : Ribonuclease H-like
GO :
0003676 : Molecular Function : nucleic acid binding
0003887 : Molecular Function : DNA-directed DNA polymerase activity
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 9, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0022184
HIT000638663 (
ENST00000539618
)
(Similar to DNA polymerase epsilon catalytic subunit A; EC=2.7.7.7; DNA polymerase II subunit A;)
genome : 133,257,117 - 133,257,865 (749)
query : 1 - 299 (299/299)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0022184
HIT000638402 (
ENST00000539357
)
(Similar to DNA polymerase epsilon catalytic subunit A; EC=2.7.7.7; DNA polymerase II subunit A;)
genome : 133,257,614 - 133,263,951 (6,338)
query : 1 - 364 (364/364)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 11.5, extr 5, mito 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0036934
HIT000070594
(
AF128543
)
Representative transcript
(Non-protein coding transcript.)
genome : 133,262,083 - 133,262,290 (208)
query : 1 - 206 (206/206)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036934)
HIX0022184
HIT000070593
(
AF128542
)
(Hypothetical short protein.)
genome : 133,263,840 - 133,264,056 (217)
query : 1 - 217 (217/217)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022184)
HIX0017319
HIT000075007
(
AF250136
)
(Peroxisomal membrane protein 2.)
genome : 133,264,192 - 133,281,577 (17,386)
query : 1 - 957 (957/977)
5 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, plas 2, pero 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000207365 (
NM_018663
)
(Peroxisomal membrane protein 2; 22 kDa peroxisomal membrane protein;)
genome : 133,264,192 - 133,281,577 (17,386)
query : 1 - 957 (957/977)
5 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007248 : Mpv17/PMP22
GO :
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, plas 2, pero 2, golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000121310 (
ENST00000317479
)
(Peroxisomal membrane protein 2; 22 kDa peroxisomal membrane protein;)
genome : 133,264,192 - 133,281,576 (17,385)
query : 1 - 956 (956/956)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007248 : Mpv17/PMP22
GO :
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, plas 2, pero 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000034608
(
BC009836
)
(Peroxisomal membrane protein 2; 22 kDa peroxisomal membrane protein;)
genome : 133,264,226 - 133,281,570 (17,345)
query : 9 - 925 (917/949)
5 exons
identity = 0.997
5'(0.993;0.991;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR007248 : Mpv17/PMP22
GO :
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, plas 2, pero 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000265217
(
BC073997
)
(Peroxisomal membrane protein 2.)
genome : 133,264,221 - 133,281,570 (17,350)
query : 1 - 921 (921/935)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007248 : Mpv17/PMP22
GO :
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, plas 2, pero 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000642634 (
ENST00000543589
)
(Similar to Peroxisomal membrane protein 2; 22 kDa peroxisomal membrane protein;)
genome : 133,264,228 - 133,281,571 (17,344)
query : 1 - 632 (632/632)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007248 : Mpv17/PMP22
GO :
0016021 : Cellular Component : integral to membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 7.16667, nucl 6.5, cyto 4.5,
cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000526894 (
ENST00000428960
)
(Similar to Peroxisomal membrane protein 2; 22 kDa peroxisomal membrane protein;)
genome : 133,264,257 - 133,291,624 (27,368)
query : 1 - 876 (876/890)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.984
InterPro :
IPR007248 : Mpv17/PMP22
GO :
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, plas 2, pero 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000083773
(
AY044439
)
(Peroxisomal membrane protein 2.)
genome : 133,264,257 - 133,281,570 (17,314)
query : 1 - 885 (885/905)
5 exons
identity = 0.999
5'(0.992;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, plas 2, pero 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000496455
(
AK301831
)
(Similar to Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform 2.)
genome : 133,264,635 - 133,294,706 (30,072)
query : 1 - 1,037 (1,037/1,050)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.988
InterPro :
IPR013078 : Histidine phosphatase superfamily, clade-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 15, cyto 12, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000644722 (
ENST00000545677
)
(Similar to Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform 2.)
genome : 133,264,635 - 133,294,706 (30,072)
query : 1 - 1,037 (1,037/1,050)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.988
InterPro :
IPR013078 : Histidine phosphatase superfamily, clade-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 15, cyto 12, mito 2, pero 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000636307 (
ENST00000537262
)
(Similar to Peroxisomal membrane protein 2; 22 kDa peroxisomal membrane protein;)
genome : 133,264,635 - 133,291,498 (26,864)
query : 1 - 567 (567/567)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007248 : Mpv17/PMP22
GO :
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 11, cyto 4.5, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000639164 (
ENST00000540119
)
(Similar to Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform 2.)
genome : 133,265,874 - 133,294,706 (28,833)
query : 1 - 982 (982/982)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR013078 : Histidine phosphatase superfamily, clade-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 15, cyto 12, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000638138 (
ENST00000539093
)
(Similar to Peroxisomal membrane protein 2; 22 kDa peroxisomal membrane protein;)
genome : 133,266,846 - 133,281,486 (14,641)
query : 1 - 519 (519/519)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007248 : Mpv17/PMP22
GO :
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 11, cyto 4.5, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000654623 (
NM_001170543
)
(Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform 1.)
genome : 133,287,393 - 133,299,323 (11,931)
query : 1 - 2,849 (2,849/2,851)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR013078 : Histidine phosphatase superfamily, clade-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11, lyso 3, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000654624 (
NM_001170544
)
(Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform 2.)
genome : 133,287,393 - 133,299,323 (11,931)
query : 1 - 2,846 (2,846/2,848)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR013078 : Histidine phosphatase superfamily, clade-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11, lyso 3, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000212453 (
NM_138575
)
(Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform 3.)
genome : 133,287,393 - 133,295,752 (8,360)
query : 1 - 1,194 (1,194/1,194)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR013078 : Histidine phosphatase superfamily, clade-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, pero 6, E.R. 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000484764
(
EU249757
)
Representative transcript
(Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform 1.)
genome : 133,287,403 - 133,298,398 (10,996)
query : 1 - 1,643 (1,643/1,643)
7 exons
identity = 0.990
5'(0.972;1.000;1.000;1.000;1.000;0.995;0.947)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11, lyso 3, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK146216
Rattus
sp. (Rat) : BC092607
Danio
sp. (Zebrafish) : BC095654
Bos
sp. (Cow) : BC149319
Tetraodon
sp. (Tetraodon) : CR638498
Gallus
sp. (Chicken) : ENSGALT00000003339
Oryzias
sp. (Medaka) : ENSORLT00000018877
Pongo
sp. (Orangutan) : ENSPPYT00000006090
Takifugu
sp. (Fugu) : SINFRUT00000182237
Macaca
sp. (Macaque) : XM_001083353
Monodelphis
sp. (Opossum) : XM_001366398
Equus
sp. (Horse) : XM_001493489
Pan
sp. (Chimpanzee) : XM_509498
Canis
sp. (Dog) : XM_543346
HIX0017319
HIT000602062 (
ENST00000498926
)
(Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform 1.)
genome : 133,287,405 - 133,299,228 (11,824)
query : 1 - 2,742 (2,742/2,742)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013078 : Histidine phosphatase superfamily, clade-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11, lyso 3, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000552742 (
ENST00000454808
)
(Similar to Serine/threonine-protein phosphatase PGAM5, mitochondrial; EC=3.1.3.16; Bcl-XL-binding protein v68; Phosphoglycerate mutase family member 5;)
genome : 133,287,436 - 133,297,414 (9,979)
query : 1 - 897 (897/897)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013078 : Histidine phosphatase superfamily, clade-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11, lyso 3, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000033668
(
BC008196
)
(Similar to Serine/threonine-protein phosphatase PGAM5, mitochondrial; EC=3.1.3.16; Bcl-XL-binding protein v68; Phosphoglycerate mutase family member 5;)
genome : 133,287,436 - 133,295,752 (8,317)
query : 1 - 1,151 (1,151/1,214)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.993;0.998)3'
coverage = 0.998
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR013078 : Histidine phosphatase superfamily, clade-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, pero 6, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000121340 (
ENST00000317555
)
(Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform 3.)
genome : 133,287,436 - 133,295,746 (8,311)
query : 1 - 1,145 (1,145/1,145)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013078 : Histidine phosphatase superfamily, clade-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, pero 6, E.R. 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000022542
(
AK097688
)
(Similar to Serine/threonine-protein phosphatase PGAM5, mitochondrial; EC=3.1.3.16; Bcl-XL-binding protein v68; Phosphoglycerate mutase family member 5;)
genome : 133,287,668 - 133,297,900 (10,233)
query : 1 - 1,773 (1,773/1,773)
6 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR013078 : Histidine phosphatase superfamily, clade-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto 9.5, cyto_nucl 7.5, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000643000 (
ENST00000543955
)
(Similar to Serine/threonine-protein phosphatase PGAM5, mitochondrial; EC=3.1.3.16; Bcl-XL-binding protein v68; Phosphoglycerate mutase family member 5;)
genome : 133,287,668 - 133,297,900 (10,233)
query : 1 - 1,773 (1,773/1,773)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013078 : Histidine phosphatase superfamily, clade-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto 9.5, cyto_nucl 7.5, mito 3, pero 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000445624
(
DQ579093
)
(Non-protein coding transcript.)
genome : 133,288,046 - 133,288,075 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000098830
(
BC047906
)
(Similar to Serine/threonine-protein phosphatase PGAM5, mitochondrial; EC=3.1.3.16; Bcl-XL-binding protein v68; Phosphoglycerate mutase family member 5;)
genome : 133,291,528 - 133,308,232 (16,705)
query : 1 - 1,331 (1,331/1,365)
7 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;0.998;0.959;1.000)3'
coverage = 1.000
InterPro :
IPR013078 : Histidine phosphatase superfamily, clade-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 8.5, cyto 8, mito_pero 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000078308
(
AF357523
)
(Non-protein coding transcript.)
genome : 133,294,025 - 133,294,125 (101)
query : 2 - 102 (101/102)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.990
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0017319
HIT000640079 (
ENST00000541034
)
(Similar to Serine/threonine-protein phosphatase PGAM5, mitochondrial; EC=3.1.3.16; Bcl-XL-binding protein v68; Phosphoglycerate mutase family member 5;)
genome : 133,294,552 - 133,297,670 (3,119)
query : 1 - 562 (562/562)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, nucl 8.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017319)
HIX0020726
HIT000000417
(
AB014592
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,302,093 - 133,331,437 (29,345)
query : 1 - 4,088 (4,088/4,088)
12 exons
identity = 1.000
3'(0.999;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR020683 : Ankyrin repeat-containing domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.8333, cyto 8,
cyto_golg 5.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000486180 (
NM_015114
)
(Ankyrin repeat and LEM domain-containing protein 2.)
genome : 133,302,254 - 133,338,451 (36,198)
query : 1 - 4,458 (4,458/4,491)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003887 : Lamino-associated polypeptide 2/emerin
IPR011015 : LEM-like domain
IPR011320 : Ribonuclease H1, N-terminal
IPR020683 : Ankyrin repeat-containing domain
GO :
0005635 : Cellular Component : nuclear envelope
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, E.R. 5, cyto_pero 4.83333, cyto 4.5, plas 4,
pero 4, mito_pero 3.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000260372
(
BC062373
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,302,254 - 133,306,845 (4,592)
query : 1 - 2,489 (2,489/2,522)
3 exons
identity = 1.000
3'(1.000;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15, cyto 4.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000266001
(
BC082962
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,302,254 - 133,306,845 (4,592)
query : 1 - 2,489 (2,489/2,522)
3 exons
identity = 1.000
3'(1.000;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15, cyto 4.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000009207
(
AK025933
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,302,254 - 133,306,532 (4,279)
query : 1 - 2,176 (2,176/2,199)
3 exons
identity = 0.999
3'(0.999;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 9.5, cyto_nucl 8.33333,
mito_pero 8.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000638650 (
ENST00000539605
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,302,254 - 133,338,399 (36,146)
query : 1 - 10,890 (10,890/10,890)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003887 : Lamino-associated polypeptide 2/emerin
IPR011015 : LEM-like domain
IPR011320 : Ribonuclease H1, N-terminal
IPR020683 : Ankyrin repeat-containing domain
GO :
0005635 : Cellular Component : nuclear envelope
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, E.R. 5, cyto_pero 4.83333, cyto 4.5, plas 4,
pero 4, mito_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000311766 (
ENST00000357997
)
(Ankyrin repeat and LEM domain-containing protein 2.)
genome : 133,302,255 - 133,338,451 (36,197)
query : 1 - 4,457 (4,457/4,457)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 8, cyto 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000007335
(
AK024061
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,302,255 - 133,319,863 (17,609)
query : 8 - 3,168 (3,161/3,168)
8 exons
identity = 1.000
3'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
InterPro :
IPR020683 : Ankyrin repeat-containing domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14.8333, cyto 8.5,
cyto_pero 5.16667, mito 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000641327 (
ENST00000542282
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,303,392 - 133,308,796 (5,405)
query : 1 - 3,302 (3,302/3,302)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, E.R. 4.5, nucl 4, E.R._mito 3, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000425825
(
AK293028
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,303,635 - 133,311,275 (7,641)
query : 1 - 1,424 (1,424/1,424)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000097488
(
BC043157
)
Representative transcript
(Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,303,702 - 133,338,417 (34,716)
query : 4 - 2,979 (2,976/2,994)
13 exons
identity = 0.998
3'(1.000;1.000;0.997;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;0.995;0.998;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto 5.5, cyto_pero 5.33333, E.R. 5, plas 4,
pero 4, mito_pero 3.33333, cyto_golg 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY325182
Mus
sp. (Mouse) : BC065071
Pongo
sp. (Orangutan) : CR858180
Equus
sp. (Horse) : ENSECAT00000026398
Gallus
sp. (Chicken) : ENSGALT00000003358
Oryzias
sp. (Medaka) : ENSORLT00000018852
Pan
sp. (Chimpanzee) : ENSPTRT00000010420
Danio
sp. (Zebrafish) : NM_001126395
Takifugu
sp. (Fugu) : SINFRUT00000173445
Monodelphis
sp. (Opossum) : XM_001377820
Bos
sp. (Cow) : XM_591880
Canis
sp. (Dog) : XM_847135
HIX0020726
HIT000018318
(
AK093451
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,303,719 - 133,308,686 (4,968)
query : 1 - 2,450 (2,450/2,450)
4 exons
identity = 0.996
3'(0.997;1.000;0.995;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000641702 (
ENST00000542657
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,303,719 - 133,308,686 (4,968)
query : 1 - 2,446 (2,446/2,446)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 15.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000641419 (
ENST00000542374
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,303,872 - 133,312,025 (8,154)
query : 1 - 515 (515/515)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 8.5, nucl 6.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000637811 (
ENST00000538766
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,303,936 - 133,311,709 (7,774)
query : 1 - 1,557 (1,557/1,557)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000605191 (
ENST00000505031
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,306,309 - 133,315,493 (9,185)
query : 1 - 2,861 (2,861/2,861)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000086029
(
BC001530
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,310,515 - 133,327,436 (16,922)
query : 19 - 1,413 (1,395/1,430)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.987
InterPro :
IPR011320 : Ribonuclease H1, N-terminal
IPR020683 : Ankyrin repeat-containing domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11.8333, cyto_golg 10.1667,
mito 6, nucl 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000091052
(
BC025347
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,310,515 - 133,327,436 (16,922)
query : 19 - 1,413 (1,395/1,430)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.987
InterPro :
IPR011320 : Ribonuclease H1, N-terminal
IPR020683 : Ankyrin repeat-containing domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11.8333, cyto_golg 10.1667,
mito 6, nucl 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000334068
(
BC050995
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,310,515 - 133,327,436 (16,922)
query : 19 - 1,413 (1,395/1,430)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.987
InterPro :
IPR011320 : Ribonuclease H1, N-terminal
IPR020683 : Ankyrin repeat-containing domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11.8333, cyto_golg 10.1667,
mito 6, nucl 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000130528 (
ENST00000337516
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,310,602 - 133,338,451 (27,850)
query : 1 - 2,014 (2,014/2,014)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR003887 : Lamino-associated polypeptide 2/emerin
IPR011015 : LEM-like domain
IPR011320 : Ribonuclease H1, N-terminal
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0005635 : Cellular Component : nuclear envelope
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, pero 5.5, E.R. 4.5, cyto_pero 4,
E.R._mito 3.5, plas 3, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000637636 (
ENST00000538591
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,311,554 - 133,319,840 (8,287)
query : 1 - 886 (886/886)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 9, mito 8, cyto_nucl 6.5, E.R._mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000634081 (
ENST00000535036
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,311,993 - 133,324,614 (12,622)
query : 1 - 749 (749/749)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000644668 (
ENST00000545623
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,313,629 - 133,327,920 (14,292)
query : 1 - 1,288 (1,288/1,288)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011320 : Ribonuclease H1, N-terminal
IPR020683 : Ankyrin repeat-containing domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10.5, cyto_nucl 7.5, mito 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000637682 (
ENST00000538637
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,318,412 - 133,319,834 (1,423)
query : 1 - 161 (161/161)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 8, E.R._mito 5.5, cyto 4.5,
cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0020726
HIT000645106 (
ENST00000546061
)
(Similar to Ankyrin repeat and LEM domain-containing protein 2;)
genome : 133,319,825 - 133,325,613 (5,789)
query : 1 - 562 (562/562)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 11, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020726)
HIX0210937
HIT000638368 (
ENST00000539323
)
Representative transcript
(Conserved hypothetical protein.)
genome : 133,321,742 - 133,322,315 (574)
query : 1 - 574 (574/574)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15.5, extr_plas 9.5, nucl 5, pero 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210937)
HIX0011141
HIT000095052
(
BC037937
)
(Hypothetical protein.)
genome : 133,345,500 - 133,346,755 (1,256)
query : 9 - 1,264 (1,256/1,278)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, plas 8, cyto_mito 8, mito_pero 8,
mito_nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000102779 (
ENST00000204726
)
(Golgin subfamily A member 3 isoform 1.)
genome : 133,345,495 - 133,405,288 (59,794)
query : 1 - 9,252 (9,252/9,252)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.1667, cyto 8.5,
cyto_golg 6.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000202545 (
NM_005895
)
(Golgin subfamily A member 3 isoform 1.)
genome : 133,345,495 - 133,405,288 (59,794)
query : 1 - 9,252 (9,252/9,252)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009053 : Prefoldin
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.1667, cyto 8.5,
cyto_golg 6.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000548725 (
ENST00000450791
)
(Golgin subfamily A member 3 isoform 1.)
genome : 133,345,495 - 133,405,288 (59,794)
query : 1 - 9,132 (9,132/9,132)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 4, cyto_nucl 2, E.R._mito 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000101695
(
D63997
)
(Similar to Golgin subfamily A member 3 isoform 2.)
genome : 133,345,499 - 133,404,998 (59,500)
query : 1 - 6,640 (6,640/6,640)
25 exons
identity = 0.997
3'(0.997;0.994;0.988;0.970;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.986;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009053 : Prefoldin
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.1667, cyto 8.5,
cyto_golg 6.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0022363
HIT000017090
(
AK092223
)
Representative transcript
(Hypothetical protein.)
genome : 133,345,501 - 133,347,521 (2,021)
query : 1 - 2,015 (2,015/2,017)
1 exon
identity = 0.984
5'(0.984)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 11.5, cyto_nucl 11.1667, cyto 5.5,
cyto_pero 4.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022363)
HIX0011141
HIT000080484
(
AF485338
)
(Similar to Golgin subfamily A member 3 isoform 2.)
genome : 133,349,590 - 133,398,717 (49,128)
query : 1 - 4,600 (4,600/4,606)
23 exons
identity = 0.998
3'(0.993;1.000;1.000;0.992;0.992;1.000;1.000;
1.000;1.000;0.986;1.000;0.996;1.000;0.997;
1.000;1.000;0.995;1.000;1.000;1.000;0.991;
1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.1667, cyto 8.5,
cyto_golg 6.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000098917
(
BC048203
)
(Similar to Golgin subfamily A member 3 isoform 2.)
genome : 133,349,843 - 133,372,544 (22,702)
query : 1 - 1,983 (1,983/2,063)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.969
InterPro :
IPR009053 : Prefoldin
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16.1667, cyto_golg 11.3333,
nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000640058 (
ENST00000541013
)
(Similar to Golgin subfamily A member 3; Golgi complex-associated protein of 170 kDa; GCP170; Golgin-160;)
genome : 133,349,846 - 133,352,874 (3,029)
query : 1 - 488 (488/488)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000058882
(
AB027133
)
(Similar to Golgin subfamily A member 3 isoform 2.)
genome : 133,351,084 - 133,405,010 (53,927)
query : 1 - 5,067 (5,067/5,090)
22 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.996;0.997;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.1667, cyto 8.5,
cyto_golg 6.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000554817 (
ENST00000456883
)
(Similar to Golgin subfamily A member 3 isoform 2.)
genome : 133,351,697 - 133,405,288 (53,592)
query : 1 - 4,732 (4,732/4,732)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.1667, cyto 8.5,
cyto_golg 6.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000191706
(
L06148
)
(Similar to Golgin subfamily A member 3; Golgi complex-associated protein of 170 kDa; GCP170; Golgin-160;)
genome : 133,351,825 - 133,372,569 (20,745)
query : 31 - 1,738 (1,708/1,738)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.992)5'
coverage = 0.983
InterPro :
IPR009053 : Prefoldin
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15.1667, cyto_golg 12.1667,
nucl 6.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000435361
(
BC142658
)
(Golgin subfamily A member 3 isoform 2.)
genome : 133,360,454 - 133,405,426 (44,973)
query : 1 - 3,784 (3,784/3,819)
16 exons
identity = 0.999
3'(0.998;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 17.3333, cyto 8.5,
cyto_golg 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000435539
(
BC146675
)
(Golgin subfamily A member 3 isoform 2.)
genome : 133,360,454 - 133,405,426 (44,973)
query : 1 - 3,784 (3,784/3,819)
16 exons
identity = 0.999
3'(0.998;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 17.3333, cyto 8.5,
cyto_golg 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000654930 (
NM_001172557
)
(Golgin subfamily A member 3 isoform 2.)
genome : 133,360,454 - 133,405,426 (44,973)
query : 1 - 3,784 (3,784/3,819)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 17.3333, cyto 8.5,
cyto_golg 5.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000644920 (
ENST00000545875
)
(Golgin subfamily A member 3 isoform 2.)
genome : 133,360,454 - 133,405,426 (44,973)
query : 1 - 3,784 (3,784/3,784)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 17.3333, cyto 8.5,
cyto_golg 5.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000636497 (
ENST00000537452
)
(Golgin subfamily A member 3 isoform 2.)
genome : 133,360,454 - 133,398,898 (38,445)
query : 1 - 3,747 (3,747/3,747)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 17.3333, cyto 8.5,
cyto_golg 5.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000260128
(
BC060826
)
(Similar to Golgin subfamily A member 3; Golgi complex-associated protein of 170 kDa; GCP170; Golgin-160;)
genome : 133,367,833 - 133,405,450 (37,618)
query : 1 - 2,761 (2,761/2,776)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009053 : Prefoldin
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 17, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0210680
HIT000462568_07
(
DQ596037
)
Representative transcript
(Non-protein coding transcript.)
genome : 133,385,768 - 133,385,798 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210680)
HIX0011141
HIT000640386 (
ENST00000541341
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,398,773 - 133,424,778 (26,006)
query : 1 - 581 (581/581)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000636362 (
ENST00000537317
)
(Non-protein coding transcript.)
genome : 133,398,858 - 133,405,444 (6,587)
query : 1 - 298 (298/298)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0037158
HIT000522986 (
ENST00000425052
)
(Similar to 40S ribosomal protein S11;)
genome : 133,402,287 - 133,402,772 (486)
query : 1 - 486 (486/486)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000266 : Ribosomal protein S17
IPR012340 : Nucleic acid-binding, OB-fold
IPR016027 : Nucleic acid-binding, OB-fold-like
IPR019978 : Ribosomal protein S17, archaeal
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 12, cyto_nucl 8.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037158)
HIX0037158
HIT000592090 (
ENST00000488441
)
(Similar to 40S ribosomal protein S11;)
genome : 133,402,287 - 133,402,770 (484)
query : 1 - 484 (484/484)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000266 : Ribosomal protein S17
IPR012340 : Nucleic acid-binding, OB-fold
IPR016027 : Nucleic acid-binding, OB-fold-like
IPR019978 : Ribosomal protein S17, archaeal
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 12, cyto_nucl 8.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037158)
HIX0037158
HIT000281043
(
CR601848
)
Representative transcript
(Similar to 40S ribosomal protein S11;)
genome : 133,402,289 - 133,402,829 (541)
query : 1 - 541 (541/541)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000266 : Ribosomal protein S17
IPR012340 : Nucleic acid-binding, OB-fold
IPR016027 : Nucleic acid-binding, OB-fold-like
IPR019978 : Ribosomal protein S17, archaeal
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 10, cyto_nucl 8, mito 7, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037158)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : ENSBTAT00000003005
Canis
sp. (Dog) : ENSCAFT00000029744
Monodelphis
sp. (Opossum) : ENSMODT00000007309
Rattus
sp. (Rat) : ENSRNOT00000017398
Macaca
sp. (Macaque) : XM_001099340
Pan
sp. (Chimpanzee) : XM_001137522
Mus
sp. (Mouse) : XM_887553
HIX0011141
HIT000634012 (
ENST00000534967
)
(Hypothetical short protein.)
genome : 133,404,410 - 133,405,317 (908)
query : 1 - 484 (484/484)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 8.5, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0171588
HIT000070592
(
AF128541
)
Representative transcript
(Similar to DNA polymerase epsilon catalytic subunit isoform a; HCG2007366; Fragment;)
genome : 133,413,293 - 133,414,030 (738)
query : 1 - 745 (745/745)
1 exon
identity = 0.988
3'(0.988)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 11.5, extr 11, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171588)
HIX0011141
HIT000035636
(
BC012072
)
(E3 ubiquitin-protein ligase CHFR isoform 3.)
genome : 133,416,938 - 133,463,922 (46,985)
query : 1 - 3,171 (3,171/3,189)
17 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;0.994;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000207048 (
NM_018223
)
(E3 ubiquitin-protein ligase CHFR isoform 5.)
genome : 133,416,938 - 133,464,204 (47,267)
query : 1 - 3,158 (3,158/3,168)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000561934 (
NM_001161344
)
(E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,416,938 - 133,464,204 (47,267)
query : 1 - 3,281 (3,281/3,291)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000561935 (
NM_001161345
)
(E3 ubiquitin-protein ligase CHFR isoform 2.)
genome : 133,416,938 - 133,464,204 (47,267)
query : 1 - 3,278 (3,278/3,288)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000561936 (
NM_001161346
)
(E3 ubiquitin-protein ligase CHFR isoform 3.)
genome : 133,416,938 - 133,464,204 (47,267)
query : 1 - 3,245 (3,245/3,255)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000561937 (
NM_001161347
)
(E3 ubiquitin-protein ligase CHFR isoform 5.)
genome : 133,416,938 - 133,464,204 (47,267)
query : 1 - 3,005 (3,005/3,015)
16 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;0.988;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000635888 (
ENST00000536843
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,416,937 - 133,425,577 (8,641)
query : 1 - 2,422 (2,422/2,422)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000015815
(
AK090948
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,416,937 - 133,425,410 (8,474)
query : 1 - 2,257 (2,257/2,257)
5 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000004132
(
AK001658
)
(E3 ubiquitin-protein ligase CHFR isoform 4.)
genome : 133,416,938 - 133,464,184 (47,247)
query : 1 - 3,138 (3,138/3,138)
18 exons
identity = 0.996
3'(0.995;1.000;0.991;1.000;1.000;1.000;1.000;
0.993;0.994;0.988;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000110074 (
ENST00000266880
)
(E3 ubiquitin-protein ligase CHFR isoform 2.)
genome : 133,416,938 - 133,464,184 (47,247)
query : 1 - 3,261 (3,261/3,261)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000120571 (
ENST00000315585
)
(E3 ubiquitin-protein ligase CHFR isoform 5.)
genome : 133,416,938 - 133,464,184 (47,247)
query : 1 - 3,138 (3,138/3,138)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000540981 (
ENST00000443047
)
(E3 ubiquitin-protein ligase CHFR isoform 5.)
genome : 133,416,938 - 133,464,184 (47,247)
query : 1 - 2,985 (2,985/2,985)
16 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.988;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000547990 (
ENST00000450056
)
(E3 ubiquitin-protein ligase CHFR isoform 3.)
genome : 133,416,938 - 133,464,184 (47,247)
query : 1 - 3,141 (3,141/3,141)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.988;1.000;1.000;1.000;0.969;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000011531
(
AK054917
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein;)
genome : 133,416,938 - 133,424,388 (7,451)
query : 1 - 2,186 (2,186/2,186)
4 exons
identity = 0.997
3'(0.998;1.000;1.000;0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000644091 (
ENST00000545046
)
(Similar to Uncharacterized protein;)
genome : 133,416,938 - 133,424,388 (7,451)
query : 1 - 2,186 (2,186/2,186)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000305100
(
CR625905
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,416,991 - 133,430,690 (13,700)
query : 1 - 2,412 (2,412/2,412)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, plas 2, cyto_mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000643313 (
ENST00000544268
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,416,991 - 133,430,690 (13,700)
query : 1 - 2,412 (2,412/2,412)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, plas 2, cyto_mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000636567 (
ENST00000537522
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,417,234 - 133,433,221 (15,988)
query : 24 - 1,827 (1,804/1,827)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994)5'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 12, extr 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000022525
(
AK097671
)
(Similar to E3 ubiquitin-protein ligase CHFR isoform 2.)
genome : 133,417,496 - 133,459,603 (42,108)
query : 1 - 2,448 (2,448/2,448)
16 exons
identity = 0.995
3'(0.994;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;0.994;0.988;1.000;1.000;1.000;1.000;
1.000;0.957)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000640273 (
ENST00000541228
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,417,496 - 133,459,603 (42,108)
query : 1 - 2,446 (2,446/2,446)
16 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.988;1.000;1.000;1.000;1.000;
1.000;0.957)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000640882 (
ENST00000541837
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,417,496 - 133,454,687 (37,192)
query : 1 - 2,425 (2,425/2,425)
16 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.988;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000010959
(
AK027687
)
(E3 ubiquitin-protein ligase CHFR isoform 3.)
genome : 133,417,540 - 133,464,198 (46,659)
query : 1 - 2,639 (2,639/2,639)
18 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000072382
(
AF170724
)
Representative transcript
(E3 ubiquitin-protein ligase CHFR isoform 1.)
genome : 133,417,566 - 133,464,194 (46,629)
query : 17 - 2,661 (2,645/2,679)
18 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK169182
Rattus
sp. (Rat) : BC087162
Danio
sp. (Zebrafish) : BC153311
Pongo
sp. (Orangutan) : CR857284
Canis
sp. (Dog) : ENSCAFT00000009830
Gallus
sp. (Chicken) : ENSGALT00000003414
Macaca
sp. (Macaque) : ENSMMUT00000021692
Monodelphis
sp. (Opossum) : ENSMODT00000019422
Oryzias
sp. (Medaka) : ENSORLT00000018797
Tetraodon
sp. (Tetraodon) : GSTENT00031066001
Takifugu
sp. (Fugu) : SINFRUT00000158754
Equus
sp. (Horse) : XM_001493348
Pan
sp. (Chimpanzee) : XR_024215
Bos
sp. (Cow) : XR_027584
HIX0011141
HIT000644704 (
ENST00000545659
)
(Similar to Uncharacterized protein;)
genome : 133,417,592 - 133,424,459 (6,868)
query : 1 - 1,603 (1,603/1,603)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000643138 (
ENST00000544093
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,417,711 - 133,428,244 (10,534)
query : 1 - 942 (942/942)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000498957
(
AK304333
)
(E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,417,946 - 133,464,191 (46,246)
query : 1 - 2,257 (2,257/2,257)
18 exons
identity = 0.996
3'(0.992;1.000;0.991;0.989;1.000;1.000;1.000;
1.000;0.994;0.988;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000634572 (
ENST00000535527
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,417,959 - 133,433,151 (15,193)
query : 1 - 746 (746/746)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, extr 3, nucl 3, cyto_pero 3,
cyto_plas 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000637280 (
ENST00000538235
)
(Similar to E3 ubiquitin-protein ligase CHFR isoform 2.)
genome : 133,417,979 - 133,430,075 (12,097)
query : 1 - 687 (687/687)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000497409
(
AK302785
)
(E3 ubiquitin-protein ligase CHFR isoform 5.)
genome : 133,418,101 - 133,464,189 (46,089)
query : 1 - 1,827 (1,827/1,827)
16 exons
identity = 0.998
3'(1.000;1.000;1.000;0.989;1.000;1.000;1.000;
1.000;0.994;0.988;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001841 : Zinc finger, RING-type
IPR008984 : SMAD/FHA domain
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000602643 (
ENST00000502279
)
(Similar to E3 ubiquitin-protein ligase CHFR isoform 2.)
genome : 133,424,741 - 133,426,546 (1,806)
query : 1 - 1,423 (1,423/1,423)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000530495 (
ENST00000432561
)
(E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,424,772 - 133,464,184 (39,413)
query : 1 - 1,591 (1,591/1,591)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, extr 12, cyto_nucl 11.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000610743 (
ENST00000511001
)
(Hypothetical short protein.)
genome : 133,430,223 - 133,431,641 (1,419)
query : 1 - 892 (892/892)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 10.5, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000634942 (
ENST00000535897
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,435,665 - 133,438,490 (2,826)
query : 1 - 587 (587/587)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 8, cyto_golg 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000640862 (
ENST00000541817
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,438,051 - 133,481,480 (43,430)
query : 1 - 717 (717/717)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR008984 : SMAD/FHA domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000640008 (
ENST00000540963
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,438,133 - 133,464,118 (25,986)
query : 1 - 875 (875/875)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR008984 : SMAD/FHA domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0036912
HIT000066798
(
AF085919
)
Representative transcript
(Hypothetical short protein.)
genome : 133,441,390 - 133,441,902 (513)
query : 1 - 513 (513/522)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036912)
HIX0011142
HIT000014190
(
AK057576
)
Representative transcript
(Pseudogene candidate (Keratin-associated protein 5-1; Ultra high sulfur serine protein 1; UHS-Ser-1;).)
genome : 133,442,441 - 133,444,544 (2,104)
query : 1 - 2,104 (2,104/2,104)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011142)
HIX0011141
HIT000639582 (
ENST00000540537
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,446,202 - 133,485,733 (39,532)
query : 1 - 916 (916/916)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR008984 : SMAD/FHA domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000641759 (
ENST00000542714
)
(Similar to E3 ubiquitin-protein ligase CHFR isoform 3.)
genome : 133,446,225 - 133,481,459 (35,235)
query : 1 - 542 (542/542)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR008984 : SMAD/FHA domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 10.5, cyto_nucl 9.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000635977 (
ENST00000536932
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,446,310 - 133,532,890 (86,581)
query : 1 - 584 (584/584)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR008984 : SMAD/FHA domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 5, cyto_pero 3.83333, cyto_nucl 3.66667,
cyto 3.5, nucl 2.5, extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000636596 (
ENST00000537551
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,447,311 - 133,464,108 (16,798)
query : 1 - 596 (596/596)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR008984 : SMAD/FHA domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 8.5, cyto_nucl 7.5, mito 7, cyto 5.5,
extr_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000634226 (
ENST00000535181
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,448,491 - 133,463,927 (15,437)
query : 18 - 753 (736/753)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.977
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR008984 : SMAD/FHA domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10, nucl 6, mito 5, cyto_pero 5,
cyto_plas 5, cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000635241 (
ENST00000536196
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,448,559 - 133,464,158 (15,600)
query : 1 - 597 (597/597)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR008984 : SMAD/FHA domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto 8, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000466409
(
DQ599878
)
(Non-protein coding transcript.)
genome : 133,448,894 - 133,448,924 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000602087 (
ENST00000499045
)
(Similar to E3 ubiquitin-protein ligase CHFR; EC=6.3.2.-; Checkpoint with forkhead and RING finger domains protein; RING finger protein 196;)
genome : 133,454,147 - 133,485,772 (31,626)
query : 1 - 505 (505/505)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0210874
HIT000635820 (
ENST00000536775
)
Representative transcript
(Ribosomal protein L7Ae/L30e/S12e/Gadd45 domain containing protein.)
genome : 133,476,570 - 133,476,954 (385)
query : 1 - 385 (385/385)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR004038 : Ribosomal protein L7Ae/L30e/S12e/Gadd45
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, nucl 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210874)
HIX0019451
HIT000012571
(
AK055957
)
Representative transcript
(Hypothetical short protein.)
genome : 133,485,301 - 133,490,880 (5,580)
query : 1 - 1,730 (1,730/1,730)
3 exons
identity = 0.992
5'(0.998;0.995;0.990)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 7.5, extr 7, cyto_nucl 6.5,
E.R._mito 6.5, mito_pero 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019451)
HIX0019451
HIT000603967 (
ENST00000503695
)
(Hypothetical protein.)
genome : 133,488,056 - 133,491,318 (3,263)
query : 1 - 2,755 (2,755/2,755)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto_nucl 8, mito 7, nucl 6, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019451)
HIX0019451
HIT000021637
(
AK096782
)
(Hypothetical protein.)
genome : 133,488,105 - 133,491,318 (3,214)
query : 1 - 2,711 (2,711/2,711)
2 exons
identity = 0.990
5'(0.995;0.987)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto_nucl 8, mito 7, nucl 6, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019451)
HIX0011141
HIT000027103
(
AL832191
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,498,047 - 133,532,868 (34,822)
query : 2 - 6,164 (6,163/6,239)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000654084 (
NM_001164715
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,498,019 - 133,532,892 (34,874)
query : 1 - 6,185 (6,185/6,196)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000318942 (
NM_183238
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,498,019 - 133,532,868 (34,850)
query : 1 - 6,191 (6,191/6,202)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000027535
(
AL832623
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,498,041 - 133,532,892 (34,852)
query : 2 - 6,194 (6,193/6,213)
5 exons
identity = 0.997
3'(0.998;1.000;0.994;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000313609 (
ENST00000360187
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,498,042 - 133,532,892 (34,851)
query : 1 - 6,192 (6,192/6,192)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000475805 (
ENST00000392321
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,498,042 - 133,509,745 (11,704)
query : 12 - 5,936 (5,925/5,936)
3 exons
identity = 1.000
3'(1.000;1.000;0.992)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000011145
(
AK027873
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,498,045 - 133,532,877 (34,833)
query : 1 - 2,173 (2,173/2,173)
5 exons
identity = 0.997
3'(0.997;0.997;1.000;0.994;0.980)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000042751
(
AK122878
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,498,048 - 133,532,892 (34,845)
query : 1 - 6,156 (6,156/6,156)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000349652_02 (
ENST00000368372
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,502,307 - 133,509,756 (7,450)
query : 1 - 1,578 (1,578/1,578)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.43
KEGG pathway :
00310 : Lysine degradation (49)
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000260628_02
(
BC062737
)
(Hypothetical protein.)
genome : 133,518,710 - 133,532,592 (13,883)
query : 1 - 1,322 (1,322/1,353)
3 exons
identity = 0.998
3'(0.999;1.000;0.996)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 5, cyto 4.5, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000638854_01 (
ENST00000539809
)
(Conserved hypothetical protein.)
genome : 133,522,302 - 133,525,201 (2,900)
query : 1 - 550 (550/550)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0011141
HIT000644239_01 (
ENST00000545194
)
(Hypothetical protein.)
genome : 133,524,770 - 133,532,877 (8,108)
query : 1 - 136 (136/136)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 9.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011141)
HIX0211070
HIT000643798_01 (
ENST00000544753
)
Representative transcript
(Conserved hypothetical protein.)
genome : 133,548,963 - 133,549,383 (421)
query : 1 - 421 (421/421)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211070)
HIX0192144
HIT000637001_01 (
ENST00000537956
)
(Hypothetical short protein.)
genome : 133,562,951 - 133,582,762 (19,812)
query : 1 - 733 (733/733)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 6, cyto_nucl 4.16667, mito_pero 4.16667,
cyto_pero 3.66667, nucl 3, cyto 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0192144
HIT000424040_02
(
AK291243
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,562,967 - 133,588,104 (25,138)
query : 1 - 2,099 (2,099/2,099)
4 exons
identity = 0.998
5'(0.998;0.992;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0192144
HIT000644146_01 (
ENST00000545101
)
(Hypothetical short protein.)
genome : 133,563,004 - 133,582,776 (19,773)
query : 1 - 590 (590/590)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0192144
HIT000639283_01 (
ENST00000540238
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,563,029 - 133,586,802 (23,774)
query : 1 - 639 (639/639)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 10.3333, mito 10, cyto 9.5,
cyto_nucl 8.66667, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0192144
HIT000053017_02
(
BC046206
)
Representative transcript
(Similar to Uncharacterized protein; Fragment;)
genome : 133,563,056 - 133,588,452 (25,397)
query : 24 - 2,381 (2,358/2,429)
4 exons
identity = 0.999
5'(0.998;1.000;1.000;0.999)3'
coverage = 0.990
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : ENSBTAT00000003347
Gallus
sp. (Chicken) : ENSGALT00000021492
Monodelphis
sp. (Opossum) : ENSMODT00000032403
Pongo
sp. (Orangutan) : ENSPPYT00000006098
Macaca
sp. (Macaque) : XM_001084255
Pan
sp. (Chimpanzee) : XM_001140744
Equus
sp. (Horse) : XM_001493166
Canis
sp. (Dog) : XM_543344
HIX0192144
HIT000643226_01 (
ENST00000544181
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,563,054 - 133,586,827 (23,774)
query : 1 - 834 (834/834)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, mito_pero 12, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0192144
HIT000207640_02 (
NM_019591
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,563,056 - 133,589,153 (26,098)
query : 1 - 3,059 (3,059/3,083)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0192144
HIT000125676_02 (
ENST00000328654
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,563,056 - 133,589,153 (26,098)
query : 1 - 3,059 (3,059/3,059)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0192144
HIT000475085_02 (
ENST00000391574
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,563,056 - 133,589,153 (26,098)
query : 1 - 3,059 (3,059/3,059)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,563,427 - 133,588,067 (24,641)
query : 1 - 1,701 (1,701/1,701)
5 exons
identity = -0.580
5'()3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
CAGE tag :
HIX0210577
HIT000615378_01 (
ENST00000515975
)
Representative transcript
(Non-protein coding transcript.)
genome : 133,571,776 - 133,571,888 (113)
query : 1 - 113 (113/113)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210577)
HIX0210577
HIT000615863_01 (
ENST00000516460
)
(Non-protein coding transcript.)
genome : 133,571,776 - 133,571,888 (113)
query : 1 - 113 (113/113)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210577)
HIX0192144
HIT000042814_02
(
AK122941
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,580,990 - 133,588,713 (7,724)
query : 1 - 4,854 (4,854/4,854)
3 exons
identity = 0.999
5'(0.999;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0192144
HIT000633879_01 (
ENST00000534834
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,580,990 - 133,588,713 (7,724)
query : 1 - 4,853 (4,853/4,853)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0192144
HIT000003237_02
(
AK000762
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,586,770 - 133,589,154 (2,385)
query : 1 - 2,385 (2,385/2,385)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0192144
HIT000384426_02
(
AK225296
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,586,770 - 133,588,103 (1,334)
query : 1 - 1,334 (1,334/1,334)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0192144
HIT000027969_02
(
AL833057
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,587,196 - 133,589,153 (1,958)
query : 1 - 1,958 (1,958/1,985)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0192144
HIT000033677_02
(
BC008211
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,587,233 - 133,589,153 (1,921)
query : 1 - 1,921 (1,921/1,945)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0192144
HIT000099883_02
(
BT006963
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,587,468 - 133,588,065 (598)
query : 1 - 598 (598/600)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0192144
HIT000321764_02
(
X52351
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,587,825 - 133,587,992 (168)
query : 1 - 168 (168/168)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
HIX0171633
HIT000093055_02
(
BC033344
)
Representative transcript
(Hypothetical short protein.)
genome : 133,609,248 - 133,613,808 (4,561)
query : 1 - 1,149 (1,149/1,164)
3 exons
identity = 0.997
3'(0.998;1.000;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 8, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171633)
HIX0211100
HIT000645078_01 (
ENST00000546033
)
Representative transcript
(Dual-specific/protein-tyrosine phosphatase, conserved region domain containing protein.)
genome : 133,610,089 - 133,610,542 (454)
query : 1 - 454 (454/454)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000387 : Dual-specific/protein-tyrosine phosphatase, conserved region
GO :
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211100)
HIX0171587
HIT000200259_02 (
NM_003428
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,613,878 - 133,639,885 (26,008)
query : 1 - 7,021 (7,021/7,025)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000475803_02 (
ENST00000392319
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,613,878 - 133,639,884 (26,007)
query : 1 - 7,020 (7,020/7,020)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000549861_01 (
ENST00000451927
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,613,878 - 133,639,884 (26,007)
query : 1 - 7,020 (7,020/7,020)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000642803_01 (
ENST00000543758
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,613,887 - 133,636,192 (22,306)
query : 1 - 3,501 (3,501/3,501)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000195196_02
(
M27878
)
Representative transcript
(Similar to Uncharacterized protein; Fragment;)
genome : 133,613,978 - 133,636,188 (22,211)
query : 10 - 3,237 (3,228/3,257)
5 exons
identity = 0.996
5'(0.961;0.990;1.000;0.990;0.998)3'
coverage = 0.991
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171275
Pongo
sp. (Orangutan) : CR860132
Bos
sp. (Cow) : ENSBTAT00000003347
Monodelphis
sp. (Opossum) : ENSMODT00000005699
Pan
sp. (Chimpanzee) : XM_001141375
Equus
sp. (Horse) : XM_001493166
HIX0171587
HIT000638399_01 (
ENST00000539354
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,613,976 - 133,636,192 (22,217)
query : 1 - 3,237 (3,237/3,237)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000641919_01 (
ENST00000542874
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,613,978 - 133,625,398 (11,421)
query : 1 - 539 (539/539)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13.5, cyto 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000559264_01 (
NM_001127372
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,613,980 - 133,639,885 (25,906)
query : 1 - 6,935 (6,935/6,939)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000125116_02 (
ENST00000327668
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,613,980 - 133,639,884 (25,905)
query : 1 - 6,934 (6,934/6,934)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000536562_01 (
ENST00000438628
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,613,980 - 133,639,884 (25,905)
query : 1 - 6,934 (6,934/6,934)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000639076_01 (
ENST00000540031
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,614,065 - 133,634,011 (19,947)
query : 1 - 960 (960/960)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000638143_01 (
ENST00000539098
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,614,089 - 133,624,890 (10,802)
query : 1 - 598 (598/598)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 11.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000260464_02
(
BC062552
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,614,096 - 133,636,187 (22,092)
query : 1 - 3,105 (3,105/3,126)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000433098_02
(
AK314232
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,614,101 - 133,635,518 (21,418)
query : 1 - 2,438 (2,438/2,438)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000638731_01 (
ENST00000539686
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,614,111 - 133,624,942 (10,832)
query : 1 - 637 (637/637)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 11.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000635168_01 (
ENST00000536123
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,614,116 - 133,625,361 (11,246)
query : 1 - 558 (558/558)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13.5, cyto 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000094549_02
(
BC036656
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,614,168 - 133,636,187 (22,020)
query : 4 - 3,451 (3,448/3,466)
5 exons
identity = 0.994
5'(0.956;1.000;1.000;1.000;0.998)3'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000642355_01 (
ENST00000543310
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,615,461 - 133,625,430 (9,970)
query : 1 - 562 (562/562)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13.5, cyto 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000644344_01 (
ENST00000545299
)
(Hypothetical short protein.)
genome : 133,615,474 - 133,618,071 (2,598)
query : 1 - 546 (546/546)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 8, pero 8, mito_pero 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000641403_01 (
ENST00000542358
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,617,020 - 133,624,942 (7,923)
query : 1 - 1,451 (1,451/1,451)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.6667, nucl 11, extr 10, cyto 8,
cyto_pero 6.5, mito_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000637771_01 (
ENST00000538726
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,617,864 - 133,633,588 (15,725)
query : 1 - 540 (540/540)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, cyto 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000322395_02
(
X60156
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,617,865 - 133,635,521 (17,657)
query : 1 - 2,409 (2,409/2,409)
4 exons
identity = 0.999
5'(0.995;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000634484_01 (
ENST00000535439
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,617,871 - 133,639,885 (22,015)
query : 1 - 642 (642/642)
4 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 12, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000098996_02
(
BC048350
)
(Similar to Uncharacterized protein; Fragment;)
genome : 133,618,027 - 133,636,185 (18,159)
query : 1 - 2,911 (2,911/2,927)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000642169_01 (
ENST00000543124
)
(Similar to Uncharacterized protein;)
genome : 133,624,207 - 133,633,918 (9,712)
query : 1 - 1,607 (1,607/1,607)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, extr 6, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000012217_02
(
AK055603
)
(Conserved hypothetical protein.)
genome : 133,637,077 - 133,639,884 (2,808)
query : 1 - 2,809 (2,809/2,809)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0171587
HIT000011461_02
(
AK054847
)
(Conserved hypothetical protein.)
genome : 133,637,590 - 133,639,884 (2,295)
query : 1 - 2,295 (2,295/2,295)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171587)
HIX0192144
pHIT000112482 ( pHIT000112482 )
(Similar to Uncharacterized protein; Fragment;)
genome : 133,563,427 - 133,588,067 (24,641)
query : 1 - 1,701 (1,701/1,701)
5 exons
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 3
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192144)
CAGE tag :
T12F07DED0EF
AC131212.6
133239193-133252624 F +
NCBI
AC135586.8
133252625-133325537 F -
NCBI
AC136467.11
133325538-133347390 F +
NCBI
AC127070.10
133347391-133526403 F -
NCBI
AC073911.38
133526404-133639192 F -
NCBI